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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015937465.1_cds_XP_016482743.1_73936
CDS Infomation

[gene=LOC107803519] [db_xref=GeneID:107803519] [protein=ABC transporter C family member 2-like] [protein_id=XP_016482743.1] [location=join(33287..33619,33826..33971,34404..34536,36755..36911,38885..38999,39140..39220,39344..39368,40464..40520,41553..41618,42245..42319,43191..43298,44944..45078,45998..46104,46194..46287,46642..46809,47927..48067,49874..50074,50193..50291,50399..50551,50729..51133)] [gbkey=CDS]
Sequence

ATGGTTTTCAAGCCATTGGATTGGTACTGCCAACCAGTGGCAAACGGTGTGTGGTCAAAG
GCTGTCGAAAATGCCTTTGGTGCTTATACCCCATGCGGAACAAACACTCTGGTTATCTCT
GTTTGTCATCTAGTCCTTTTAGCCTTGTGCTTATACCGACTATGGAAAATGACAAAAGAC
CTCTCAGTCCAAAGGTTCCGCTTGAGGTCAAATTACTATAACTACATGCTGGGTCTGTTA
GCTGCTTATTGCACTGCTGAACCTTTGTTTAGATTGGTCATGGGAATGTCAGCCTTGAAT
GTAGATGGACAACCTGGTCTTGCCCCATATGAGATAATTTCTTTGACTATCGAGGCTCTT
GCTTGGTGCTCTATGCTGGTGATGATTGTTCTCGAGACGAAGGTATATATCCGTGAGGCC
AGGTGGTCTGTTCGGTTTGGAGTAATATACAGTTTGGTAGGGGACGTGGTGATNTTAGAT
TCTGATATGAACAGATATACTCACCCGTTTGAACAATCTCATTCACATCTTTCTCTTTTC
TTGCTAATCAAAGCTGTTATCTTTATCTGCAGATCAGTACTGTATTTGTACATCAGTGAG
GTTGCTGTCCAGGTATTGTTTGGATTGTTGCTGCTGTTTTATATTCCTAATATGGATCCT
TATCCCGGCTACTCCCCACTTCGAAGTGAATCTTTTGATGACACTGCATATGAAGAACTT
CCTGGAGCAGAGCAGATTTGTCCGGAGAGGCATGTCAACATATTTGCAAAAATTACTTTT
TCATGGATGAATCCTCTTATGCAACTTGGTTATAAAAGACCATTAACAGAAAAGGATGTG
TGGAAACTGGATACTTGGGATCGCACTGAAACTCTGAACAACTCGTTTCAAAAGAGTTGG
GCAGAGGAGGCTCAAAGACCTAAACCATGGCTTTTAAGAGCTTTAAACCGTAGTCTTGGT
GGAAGGTTTTGGTGGGGAGGCTTCTGGAAGATTGGAAATGATGCTTCCCAGTTCATTGGA
CCACTTATTCTAAACCAACTCTTACAGTCTATGCAACGAGGTGATCCAGCATGGATAGGC
TACATCTATGCATTCACGATTTTTGTTGGAGTGGTGTTTGGAGTTCTGTGTGAAGCTCAG
TATTTTCAGAATGTCATGCGTGTTGGATTTCGCCTCAGATCTACTTTGGTTGCAGCAGTT
TTCCGGAAGTCTTTGAGGTTAACCCATGAAAGTCGTAAAAAGTTTGCATCAGGAAAGATA
ACCAATTTGATGACAACAGATTCGGAAGCACTTCAGCAAATATGTCAGTCACTTCATACT
ATTTGGTCAGCTCCTCTTCGAATTACCGTTGCATTGGTTCTTCTTTACCAGCAATTGGGG
GTAGCAGCACTTCTTGGTGCACTTATGTTGGTTCTTATGTTTCCAGTACAGACATATGTT
ATAAGCAAGATGCAGAAACTGACAAAAGAAGGATTACAGCGAACAGACAAGAGAATTGGT
CTCATGAATGAAGTATTGGCTGCGATGGACACAGTAAAATCTTATGCATGGGAGAATAGT
TTCCAATCTAAGGTTCAGGGTGTTCGGAATGACGAGCTGACTTGGTATAGGAAAGCACAA
TTACTAGCAGCGTTGAATAGCTTCATTCTGAACAGTATTCCTGTTGTGGTGATTGTCATC
TCATTTGGGGTATTCTCGTTACTTGGAGGAGATCTAACACCAGCAAGGGCATTTACATCT
TTATCCTTGTTCGCGGTGTTGCGTTTTCCGCTTTTCATGCTTCCTAATATAATAACACAG
GTTGTTAACGCAAACGTATCGTTGAAACGTCTAGAAGAGCTTCTCTTAGCAGAAGAAAGA
ATACTTCTACCCAATCCACCTCTTGAGCCTGGACTTCCAGCCATTTCAATCAAGAATGGA
TGCTTTTCATGGGAATCAAAGGTAGAGAAACCAACATTGTCAAATATCAACTTGGATATC
CCAATTGGTAGTTTAGTAGCTGTTGTAGGGGGCACTGGAGAAGGAAAGACATCGCTAATC
TCAGCAATGCTTGGAGAGGTTCCTTCCGTTTCGGATTCAATGGTTGTCATAAGGGGAACA
GTTGCTTATGTACCGCAAGTTTCATGGATTTTTAATGCAACAGTACGTGAAAATATACTG
TTTGGTTCTGCATTTGATGCTGCAAGGTATGATAGGGCCATCGATGTGACCGCATTACGG
CATGACCTTGAATTGCTTCCGGGTGGTGATCTCACTGAAATTGGTGAACGGGGTGTGAAT
ATTAGTGGAGGGCAGAAGCAACGAGTATCCATGGCTCGGGCTGTTTATTCCAGTTCAGAT
GTTTGCATATTTGACGACCCATTAAGTGCTTTGGATGCTGATGTAGGCCGCCAGGTTTTT
GAAAGGTGCATCAAGGGAGAACTGAAAGGAAAGACCAGAGTTTTAGTCACAAACCAGCTA
CACTTCCTGTCACAAGTAGACAGAATCATACTGGTGCATGATGGTATGGTTAAAGAGGAA
GGAACCTTTGAATATCTCTCAAATAATGGGGTACTATTTCAGAAGCTGATGGAAAATGCG
GGGAAAATGGAAGAGTATACAGAAGAAAAGGAAAACAATGACAATGACAATGACAATGAC
AATGACAATGACAAATCTTCAAAACCTGTTGCTAATGGTGAGACCAATGGGGTATCTAAG
AAAGTTGGAAAAGATAGTAAGAAAGGAGGAAAATCTGTTCTTATTAAGCAGGAGGAACGG
GAAACTGGTGTAGTGAGCTGGAAAGTTTTGACGAGGTAA

Peptide Sequence

PEP ID

XP_016482743.1
PEP Infomation

PREDICTED: ABC transporter C family member 2-like [Nicotiana tabacum]
Sequence

MVFKPLDWYCQPVANGVWSKAVENAFGAYTPCGTNTLVISVCHLVLLALCLYRLWKMTKD
LSVQRFRLRSNYYNYMLGLLAAYCTAEPLFRLVMGMSALNVDGQPGLAPYEIISLTIEAL
AWCSMLVMIVLETKVYIREARWSVRFGVIYSLVGDVVXLDSDMNRYTHPFEQSHSHLSLF
LLIKAVIFICRSVLYLYISEVAVQVLFGLLLLFYIPNMDPYPGYSPLRSESFDDTAYEEL
PGAEQICPERHVNIFAKITFSWMNPLMQLGYKRPLTEKDVWKLDTWDRTETLNNSFQKSW
AEEAQRPKPWLLRALNRSLGGRFWWGGFWKIGNDASQFIGPLILNQLLQSMQRGDPAWIG
YIYAFTIFVGVVFGVLCEAQYFQNVMRVGFRLRSTLVAAVFRKSLRLTHESRKKFASGKI
TNLMTTDSEALQQICQSLHTIWSAPLRITVALVLLYQQLGVAALLGALMLVLMFPVQTYV
ISKMQKLTKEGLQRTDKRIGLMNEVLAAMDTVKSYAWENSFQSKVQGVRNDELTWYRKAQ
LLAALNSFILNSIPVVVIVISFGVFSLLGGDLTPARAFTSLSLFAVLRFPLFMLPNIITQ
VVNANVSLKRLEELLLAEERILLPNPPLEPGLPAISIKNGCFSWESKVEKPTLSNINLDI
PIGSLVAVVGGTGEGKTSLISAMLGEVPSVSDSMVVIRGTVAYVPQVSWIFNATVRENIL
FGSAFDAARYDRAIDVTALRHDLELLPGGDLTEIGERGVNISGGQKQRVSMARAVYSSSD
VCIFDDPLSALDADVGRQVFERCIKGELKGKTRVLVTNQLHFLSQVDRIILVHDGMVKEE
GTFEYLSNNGVLFQKLMENAGKMEEYTEEKENNDNDNDNDNDNDKSSKPVANGETNGVSK
KVGKDSKKGGKSVLIKQEERETGVVSWKVLTR

Transcript Sequence

Gene sequence data has not been registered.